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Table 2 The genomic positions of three CpGs showing minimum q-value predicted by using GFDB

From: Does the prenatal bisphenol A exposure alter DNA methylation levels in the mouse hippocampus?: An analysis using a high-sensitivity methylome technique

Chr.

Positiona

Gene name

Methylation level (%)

log ratiob

q-value

   

Cont (n = 6)

BPA (n = 6)

  

5

137,753,995

Trip6

18.21 ± 0.79

26.85 ± 0.67

0.17

0.24

4

35,339,023

9.3kbp up stream of RP23-307 M2.4

29.36 ± 0.34

34.67 ± 0.52

0.07

0.24

X

74,707,008

4.4kbp down stream of RP23-238B14.1

80.53 ± 1.38

65.66 ± 1.35

−0.09

0.24

  1. a, Chromosomal nucleotide position of methylated cytosine
  2. b, The ratio means fold of change (BPA/control)