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Table 1 Nucleotide sequences of primers used and amplification conditions

From: Toll-like receptor (TLR4) Asp299Gly and Thr399Ile polymorphisms in relation to clinical falciparum malaria among Nigerian children: a multisite cross-sectional immunogenetic study in Lagos

Gene

Primer

Sequence

Amplification profile Temperature °C/time (sec)

 

Product size, bp

Restriction Enzyme

Cut Product size, bp

D

A

E

C

TLR4

299TLR4F

5′-GATTAGCATACTTAGACTACTACCTCCATG-3′

94 (30)

55 (30)

72 (30)

35

249

Nco1 (Fermentas)

W = 249

299TLR4R

5-GATCAACTTCTGAAAAAGCATTCCCAC-3′

M = 223 + 26

399TLR4F

5′-GGTTGCTGTTCTCAAAGTGATTTTGGGAGAA-3′

94 (30)

55 (30)

72 (30)

35

406

Hinf1 (Fermentas)

W = 406

399TLR4R

5′-ACCTGAAGACTGGAGAGTGAGTTAAATGCT-3′

M = 377 + 29