Table 2 Alternative splicing isoforms of OGG1 CDS to NCBI
From: An active alternative splicing isoform of human mitochondrial 8-oxoguanine DNA glycosylase (OGG1)
Type | Name | mRNA | CDS | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CDS in mRNA | From exon 1 | From exon 2 | From exon 3 | From exon 4 | From exon 5 | From exon 6 | From exon 7 | From exon 8 | nt length in CDS | identical to OGG1-1a CDS | Identical to OGG1-2a CDS | ||
1 | OGG1-1a | 344-1381 | 344-480 | 481-728 | 729-908 | 909-1090 | 1091-1241 | 1242-1291 | 1292-1381 | No | 1038 | — | 1-949 |
1 | OGG1-1b | 344-1318 | 344-480 | 481-728 | 729-908 | 909-1090 | 1091-1241 | 1242-1318 | No | No | 975 | 1-951 | 1-949 |
1 | OGG1-1c | 344-1576 | 344-480 | 481-728 | 729-908 | 909-1090 | 1091-1241 | 1242-1291 | 1292-1576 | No | 1233 | 1-948, 966–1055 -1c: 949-1038-1a | 1-948 |
2 | OGG1-2a | 344-1618 | 344-480 | 481-728 | 729-908 | 909-1090 | 1091-1241 | 1242-1291 | No | 1292-1618 | 1275 | 1-949 | — |
2 | OGG1-2b | 344-1417 | 344-480 | 481-728 | 729-908 | 909-1090 | No | No | No | 1091-1417 | 1074 | 1-748 | 1-748, 749–1074 -2c: 950–1275 -2a |
2 | OGG1-2c | 344-931 | 344-480 | 481-728 | 729-908 | No | No | No | No | 909-931 | 588 | 1-569 | 1-569 |
2 | OGG1-2d | 344-1414 | 344-480 | 481-728 | 729-908 | 909-1090 | 1091-1241 | 1242-1291 | 1292-1391 | 1392-1414 | 1071 | 1-948 | 1-948 |
2 | OGG1-2e | 344-1312 | 344-480 | 481-728 | 729-908 | 909-1090 | 1091-1241 | 1242-1291 | 1292-1312 | No | 969 | 1-949 | 1-949 |